IL_6W6L_067
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 6W6L|1|t|G|1607, 6W6L|1|t|A|1619, 6W6L|1|t|A|1620
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6W6L_067 not in the Motif Atlas
- Geometric match to IL_5TBW_033
- Geometric discrepancy: 0.0855
- The information below is about IL_5TBW_033
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6W6L|1|t|G|1606
6W6L|1|t|G|1607
6W6L|1|t|G|1608
*
6W6L|1|t|U|1618
6W6L|1|t|A|1619
6W6L|1|t|A|1620
6W6L|1|t|U|1621
6W6L|1|t|C|1622
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain O
- 60S ribosomal protein L15
- Chain Q
- 60S ribosomal protein L17
- Chain k
- 60S ribosomal protein L37
- Chain y
- Nascent chain mixture
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