IL_6W6L_090
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- CGC*GGUG
- Length
- 7 nucleotides
- Bulged bases
- 6W6L|1|t|G|2322
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6W6L_090 not in the Motif Atlas
- Homologous match to IL_5TBW_057
- Geometric discrepancy: 0.3109
- The information below is about IL_5TBW_057
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- Isolated cWS basepair
- Motif group
- IL_73554.3
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 10
Unit IDs
6W6L|1|t|C|2269
6W6L|1|t|G|2270
6W6L|1|t|C|2271
*
6W6L|1|t|G|2321
6W6L|1|t|G|2322
6W6L|1|t|U|2323
6W6L|1|t|G|2324
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain D
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain b
- 60S ribosomal protein L27a
- Chain f
- 60S ribosomal protein L32
- Chain r
- 60S ribosomal protein L28
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