IL_6W6P_097

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUCU*AAGA

Length

8 nucleotides

Bulged bases

6W6P|1|A|A|2813

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W6P_097 not in the Motif Atlas

Geometric match to IL_2QEK_001

Geometric discrepancy: 0.3695

The information below is about IL_2QEK_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_57744.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

22

Unit IDs

6W6P|1|A|U|2806
6W6P|1|A|U|2807
6W6P|1|A|C|2808
6W6P|1|A|U|2809
*
6W6P|1|A|A|2812
6W6P|1|A|A|2813
6W6P|1|A|G|2814
6W6P|1|A|A|2815

Current chains

Chain A

23S rRNA

Nearby chains