IL_6W6P_136
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGUAG*CGUAGAUA
- Length
- 13 nucleotides
- Bulged bases
- 6W6P|1|a|A|717
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6W6P_136 not in the Motif Atlas
- Homologous match to IL_5J7L_035
- Geometric discrepancy: 0.1558
- The information below is about IL_5J7L_035
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
6W6P|1|a|U|699
6W6P|1|a|G|700
6W6P|1|a|U|701
6W6P|1|a|A|702
6W6P|1|a|G|703
*
6W6P|1|a|C|714
6W6P|1|a|G|715
6W6P|1|a|U|716
6W6P|1|a|A|717
6W6P|1|a|G|718
6W6P|1|a|A|719
6W6P|1|a|U|720
6W6P|1|a|A|721
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- 30S ribosomal protein S11
Coloring options: