IL_6W6P_155

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUCG*CAAAUC

Length

10 nucleotides

Bulged bases

6W6P|1|a|A|1295

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W6P_155 not in the Motif Atlas

Homologous match to IL_5J7L_055

Geometric discrepancy: 0.1393

The information below is about IL_5J7L_055

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_11344.2

Basepair signature

cWW-cSS-L-cWW

Number of instances in this motif group

2

Unit IDs

6W6P|1|a|G|1270
6W6P|1|a|U|1271
6W6P|1|a|C|1272
6W6P|1|a|G|1273
*
6W6P|1|a|C|1292
6W6P|1|a|A|1293
6W6P|1|a|A|1294
6W6P|1|a|A|1295
6W6P|1|a|U|1296
6W6P|1|a|C|1297

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14 type Z