IL_6WOO_192
3D structure
- PDB id
- 6WOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUCC*GC
- Length
- 6 nucleotides
- Bulged bases
- 6WOO|1|5|C|2772
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WOO_192 not in the Motif Atlas
- Geometric match to IL_4V83_236
- Geometric discrepancy: 0.2742
- The information below is about IL_4V83_236
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_90729.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 30
Unit IDs
6WOO|1|5|G|2770
6WOO|1|5|U|2771
6WOO|1|5|C|2772
6WOO|1|5|C|2773
*
6WOO|1|5|G|2787
6WOO|1|5|C|2788
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain L
- eL13
- Chain Q
- eL18
- Chain a
- uL15
- Chain o
- eL42
Coloring options: