IL_6XZA_096
3D structure
- PDB id
- 6XZA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 6XZA|1|A2|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XZA_096 not in the Motif Atlas
- Homologous match to IL_4WF9_036
- Geometric discrepancy: 0.0434
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
6XZA|1|A2|C|998
6XZA|1|A2|U|999
6XZA|1|A2|A|1000
6XZA|1|A2|A|1001
6XZA|1|A2|G|1002
*
6XZA|1|A2|C|1153
6XZA|1|A2|G|1154
6XZA|1|A2|A|1155
6XZA|1|A2|A|1156
6XZA|1|A2|G|1157
Current chains
- Chain A2
- 23S rRNA
Nearby chains
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain Q2
- 50S ribosomal protein L20
- Chain R2
- 50S ribosomal protein L21
- Chain Z2
- 50S ribosomal protein L30
Coloring options: