IL_6ZU5_012
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUAG*CUGGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 6ZU5|1|L50|G|687, 6ZU5|1|L50|G|691
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU5_012 not in the Motif Atlas
- Geometric match to IL_5TBW_028
- Geometric discrepancy: 0.1336
- The information below is about IL_5TBW_028
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_17470.7
- Basepair signature
- cWW-tWW-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6ZU5|1|L50|G|559
6ZU5|1|L50|A|560
6ZU5|1|L50|U|561
6ZU5|1|L50|A|562
6ZU5|1|L50|G|563
*
6ZU5|1|L50|C|685
6ZU5|1|L50|U|686
6ZU5|1|L50|G|687
6ZU5|1|L50|G|688
6ZU5|1|L50|U|689
6ZU5|1|L50|A|690
6ZU5|1|L50|G|691
6ZU5|1|L50|C|692
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain LAA
- uL15
- Chain LC0
- uL4
- Chain LJJ
- eL37
- Chain LL0
- eL13
- Chain LN0
- eL15
Coloring options: