IL_6ZU5_032
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GACCCCAG*CC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU5_032 not in the Motif Atlas
- Homologous match to IL_8C3A_052
- Geometric discrepancy: 0.1849
- The information below is about IL_8C3A_052
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_84902.1
- Basepair signature
- cWW-L-cWW-L-L-R-cHH
- Number of instances in this motif group
- 2
Unit IDs
6ZU5|1|L50|G|907
6ZU5|1|L50|A|908
6ZU5|1|L50|C|909
6ZU5|1|L50|C|910
6ZU5|1|L50|C|911
6ZU5|1|L50|C|912
6ZU5|1|L50|A|913
6ZU5|1|L50|G|914
*
6ZU5|1|L50|C|1051
6ZU5|1|L50|C|1052
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain LF0
- uL30
- Chain LFF
- eL33
- Chain LO0
- uL13
- Chain LS0
- eL20
Coloring options: