IL_6ZU5_070
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAG*CGUCG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU5_070 not in the Motif Atlas
- Geometric match to IL_5TBW_099
- Geometric discrepancy: 0.1648
- The information below is about IL_5TBW_099
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_71241.2
- Basepair signature
- cWW-cWW-tSH-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
6ZU5|1|L50|C|2063
6ZU5|1|L50|A|2064
6ZU5|1|L50|G|2065
*
6ZU5|1|L50|C|2083
6ZU5|1|L50|G|2084
6ZU5|1|L50|U|2085
6ZU5|1|L50|C|2086
6ZU5|1|L50|G|2087
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain L70
- 5S ribosomal RNA; 5S rRNA
- Chain LD0
- uL18
- Chain LJ0
- uL5
- Chain LNN
- Lso2
- Chain LT0
- eL21
Coloring options: