IL_6ZU5_087

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UCCG*CGCCG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_087 not in the Motif Atlas

Homologous match to IL_8C3A_127

Geometric discrepancy: 0.574

The information below is about IL_8C3A_127

Detailed Annotation

UAA/GAN related

Broad Annotation

UAA/GAN related

Motif group

IL_17136.4

Basepair signature

cWW-R-L-tHS-tHW-cWW

Number of instances in this motif group

18

Unit IDs

6ZU5|1|L50|U|2443
6ZU5|1|L50|C|2444
6ZU5|1|L50|C|2445
6ZU5|1|L50|G|2446
*
6ZU5|1|L50|C|2469
6ZU5|1|L50|G|2470
6ZU5|1|L50|C|2471
6ZU5|1|L50|C|2472
6ZU5|1|L50|G|2473

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LB0

uL3

Chain LDD

eL31

Chain LW0

eL24