IL_6ZVI_033
3D structure
- PDB id
- 6ZVI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mbf1-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases
- 6ZVI|1|h|A|579, 6ZVI|1|h|U|581
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZVI_033 not in the Motif Atlas
- Homologous match to IL_4V88_415
- Geometric discrepancy: 0.1173
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
6ZVI|1|h|G|562
6ZVI|1|h|U|563
6ZVI|1|h|G|564
6ZVI|1|h|C|565
6ZVI|1|h|C|566
6ZVI|1|h|A|567
6ZVI|1|h|G|568
*
6ZVI|1|h|C|575
6ZVI|1|h|G|576
6ZVI|1|h|G|577
6ZVI|1|h|U|578
6ZVI|1|h|A|579
6ZVI|1|h|A|580
6ZVI|1|h|U|581
6ZVI|1|h|U|582
6ZVI|1|h|C|583
Current chains
- Chain h
- 18S rRNA
Nearby chains
- Chain H
- 40S ribosomal protein S23-A
- Chain P
- 40S ribosomal protein S30-A
- Chain T
- MBF1 isoform 1
- Chain d
- Transfer RNA; tRNA
- Chain f
- mRNA
- Chain l
- RPS3 isoform 1
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