IL_7A5F_010

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

AAGA*UUAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_010 not in the Motif Atlas

Geometric match to IL_402D_001

Geometric discrepancy: 0.2466

The information below is about IL_402D_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_77658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

34

Unit IDs

7A5F|1|A3|A|1925
7A5F|1|A3|A|1926
7A5F|1|A3|G|1927
7A5F|1|A3|A|1928
*
7A5F|1|A3|U|1976
7A5F|1|A3|U|1977
7A5F|1|A3|A|1978
7A5F|1|A3|U|1979

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 23

39S ribosomal protein L34, mitochondrial

Chain 93

39S ribosomal protein L41, mitochondrial

Chain D3

39S ribosomal protein L2, mitochondrial