3D structure

PDB id
7ACJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
AUCACU*AAAU
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ACJ_100 not in the Motif Atlas
Geometric match to IL_5TBW_062
Geometric discrepancy: 0.3889
The information below is about IL_5TBW_062
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_51005.1
Basepair signature
cWW-L-R-tWH-cWW-L-L
Number of instances in this motif group
2

Unit IDs

7ACJ|1|1|A|2679
7ACJ|1|1|U|2680
7ACJ|1|1|C|2681
7ACJ|1|1|A|2682
7ACJ|1|1|C|2683
7ACJ|1|1|U|2684
*
7ACJ|1|1|A|2725
7ACJ|1|1|A|2726
7ACJ|1|1|A|2727
7ACJ|1|1|U|2728

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain K
50S ribosomal protein L14
Chain N
50S ribosomal protein L17
Chain P
50S ribosomal protein L19

Coloring options:


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