IL_7AJU_051
3D structure
- PDB id
- 7AJU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGAAG*CGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AJU_051 not in the Motif Atlas
- Homologous match to IL_4V88_436
- Geometric discrepancy: 0.1751
- The information below is about IL_4V88_436
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.4
- Basepair signature
- cWW-R-L-tHS-tHW-cWW
- Number of instances in this motif group
- 18
Unit IDs
7AJU|1|D3|C|990
7AJU|1|D3|G|991
7AJU|1|D3|A|992
7AJU|1|D3|A|993
7AJU|1|D3|G|994
*
7AJU|1|D3|C|1010
7AJU|1|D3|G|1011
7AJU|1|D3|U|1012
7AJU|1|D3|A|1013
7AJU|1|D3|G|1014
Current chains
- Chain D3
- 18S rRNA
Nearby chains
- Chain DO
- 40S ribosomal protein S14-A
- Chain JL
- Dimethyladenosine transferase
Coloring options: