IL_7AQD_014
3D structure
- PDB id
- 7AQD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the bacterial RQC complex (Translocating State)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCAC*GAGUGAAAGAGAUC
- Length
- 18 nucleotides
- Bulged bases
- 7AQD|1|A|G|550, 7AQD|1|A|U|554
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AQD_014 not in the Motif Atlas
- Homologous match to IL_4WF9_015
- Geometric discrepancy: 0.1771
- The information below is about IL_4WF9_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44923.2
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 10
Unit IDs
7AQD|1|A|G|528
7AQD|1|A|C|529
7AQD|1|A|A|530
7AQD|1|A|C|531
*
7AQD|1|A|G|542
7AQD|1|A|A|543
7AQD|1|A|G|544
7AQD|1|A|U|545
7AQD|1|A|G|546
7AQD|1|A|A|547
7AQD|1|A|A|548
7AQD|1|A|A|549
7AQD|1|A|G|550
7AQD|1|A|A|551
7AQD|1|A|G|552
7AQD|1|A|A|553
7AQD|1|A|U|554
7AQD|1|A|C|555
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain S
- 50S ribosomal protein L22
- Chain U
- 50S ribosomal protein L24
- Chain h
- 50S ribosomal protein L23
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