IL_7LS2_100
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAUC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS2_100 not in the Motif Atlas
- Homologous match to IL_5TBW_067
- Geometric discrepancy: 0.2744
- The information below is about IL_5TBW_067
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_95716.2
- Basepair signature
- cWW-cWW-tHS-tHS-tSH-cWW
- Number of instances in this motif group
- 18
Unit IDs
7LS2|1|A2|C|2344
7LS2|1|A2|G|2345
7LS2|1|A2|A|2346
7LS2|1|A2|U|2347
7LS2|1|A2|C|2348
*
7LS2|1|A2|G|2507
7LS2|1|A2|G|2508
7LS2|1|A2|G|2509
7LS2|1|A2|A|2510
7LS2|1|A2|G|2511
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain B1
- 60S ribosomal protein L7a
- Chain D2
- 60S ribosomal protein L8
- Chain T2
- 60S ribosomal protein L27
- Chain a2
- 60S ribosomal protein L34
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