IL_7LS2_198
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUCUAAG*CUGC
- Length
- 11 nucleotides
- Bulged bases
- 7LS2|1|m2|U|59
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS2_198 not in the Motif Atlas
- Geometric match to IL_5TBW_043
- Geometric discrepancy: 0.3576
- The information below is about IL_5TBW_043
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_71110.1
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
7LS2|1|m2|G|56
7LS2|1|m2|U|57
7LS2|1|m2|C|58
7LS2|1|m2|U|59
7LS2|1|m2|A|60
7LS2|1|m2|A|61
7LS2|1|m2|G|62
*
7LS2|1|m2|C|86
7LS2|1|m2|U|87
7LS2|1|m2|G|88
7LS2|1|m2|C|89
Current chains
- Chain m2
- 18S rRNA
Nearby chains
- Chain K3
- 40S ribosomal protein S6
- Chain Q3
- 40S ribosomal protein S24
- Chain r2
- 40S ribosomal protein S4, X isoform
Coloring options: