IL_7M4Z_037

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

GAUG*CGC

Length

7 nucleotides

Bulged bases

7M4Z|1|A|U|1030

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4Z_037 not in the Motif Atlas

Homologous match to IL_5J7L_282

Geometric discrepancy: 0.1

The information below is about IL_5J7L_282

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_57744.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

22

Unit IDs

7M4Z|1|A|G|1028
7M4Z|1|A|A|1029
7M4Z|1|A|U|1030
7M4Z|1|A|G|1031
*
7M4Z|1|A|C|1118
7M4Z|1|A|G|1119
7M4Z|1|A|C|1120

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L36

Chain L

50S ribosomal protein L16