IL_7MSM_144
3D structure
- PDB id
- 7MSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Trans_R0 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.79 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7MSM|1|a|A|523, 7MSM|1|a|U|525, 7MSM|1|a|A|526
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MSM_144 not in the Motif Atlas
- Geometric match to IL_4V88_415
- Geometric discrepancy: 0.1579
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7MSM|1|a|G|506
7MSM|1|a|U|507
7MSM|1|a|G|508
7MSM|1|a|C|509
7MSM|1|a|C|510
7MSM|1|a|A|511
7MSM|1|a|G|512
*
7MSM|1|a|C|519
7MSM|1|a|G|520
7MSM|1|a|G|521
7MSM|1|a|U|522
7MSM|1|a|A|523
7MSM|1|a|A|524
7MSM|1|a|U|525
7MSM|1|a|A|526
7MSM|1|a|C|527
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain d
- 30S ribosomal protein S4
- Chain l
- 30S ribosomal protein S12
Coloring options: