IL_7N2C_150

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CUUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7N2C|1|23|U|2132

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2C_150 not in the Motif Atlas

Homologous match to IL_3U4M_004

Geometric discrepancy: 0.3359

The information below is about IL_3U4M_004

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_90775.2

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

30

Unit IDs

7N2C|1|23|C|2129
7N2C|1|23|U|2130
7N2C|1|23|U|2131
7N2C|1|23|U|2132
7N2C|1|23|G|2133
7N2C|1|23|A|2134
7N2C|1|23|A|2135
7N2C|1|23|G|2136
*
7N2C|1|23|U|2155
7N2C|1|23|G|2156
7N2C|1|23|G|2157
7N2C|1|23|A|2158
7N2C|1|23|G|2159

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LA

50S ribosomal protein L1