IL_7NAW_035

3D structure

PDB id

7NAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state B (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.05 Å

Loop

Sequence

UGUAG*CGUAGAGA

Length

13 nucleotides

Bulged bases

7NAW|1|A|A|702

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NAW_035 not in the Motif Atlas

Geometric match to IL_8B0X_034

Geometric discrepancy: 0.1358

The information below is about IL_8B0X_034

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_71972.1

Basepair signature

cWW-tSS-tSH-L-R-tHS-L-cWW

Number of instances in this motif group

11

Unit IDs

7NAW|1|A|U|684
7NAW|1|A|G|685
7NAW|1|A|U|686
7NAW|1|A|A|687
7NAW|1|A|G|688
*
7NAW|1|A|C|699
7NAW|1|A|G|700
7NAW|1|A|U|701
7NAW|1|A|A|702
7NAW|1|A|G|703
7NAW|1|A|A|704
7NAW|1|A|G|705
7NAW|1|A|A|706

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

Small ribosomal subunit protein uS11