IL_7NAW_053

3D structure

PDB id

7NAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state B (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.05 Å

Loop

Sequence

GAAG*CGGACC

Length

10 nucleotides

Bulged bases

7NAW|1|A|A|1257, 7NAW|1|A|A|1280, 7NAW|1|A|C|1281

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NAW_053 not in the Motif Atlas

Homologous match to IL_6CZR_161

Geometric discrepancy: 0.5977

The information below is about IL_6CZR_161

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_11344.1

Basepair signature

cWW-cSS-L-R-cWW

Number of instances in this motif group

3

Unit IDs

7NAW|1|A|G|1255
7NAW|1|A|A|1256
7NAW|1|A|A|1257
7NAW|1|A|G|1258
*
7NAW|1|A|C|1277
7NAW|1|A|G|1278
7NAW|1|A|G|1279
7NAW|1|A|A|1280
7NAW|1|A|C|1281
7NAW|1|A|C|1282

Current chains

Chain A

16S rRNA

Nearby chains

Chain C

Small ribosomal subunit protein uS3

Chain J

Small ribosomal subunit protein uS10

Chain N

Small ribosomal subunit protein uS14