IL_7NRD_074
3D structure
- PDB id
- 7NRD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.36 Å
Loop
- Sequence
- AAUAAUG*CUAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRD_074 not in the Motif Atlas
- Homologous match to IL_5TBW_074
- Geometric discrepancy: 0.1487
- The information below is about IL_5TBW_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49460.3
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7NRD|1|LA|A|1883
7NRD|1|LA|A|1884
7NRD|1|LA|U|1885
7NRD|1|LA|A|1886
7NRD|1|LA|A|1887
7NRD|1|LA|U|1888
7NRD|1|LA|G|1889
*
7NRD|1|LA|C|2346
7NRD|1|LA|U|2347
7NRD|1|LA|A|2348
7NRD|1|LA|U|2349
Current chains
- Chain LA
- 25S rRNA (3184-MER)
Nearby chains
- Chain LE
- 60S ribosomal protein L3
- Chain LR
- 60S ribosomal protein L17-A
- Chain Lf
- 60S ribosomal protein L31-A
Coloring options: