IL_7NRD_132
3D structure
- PDB id
- 7NRD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.36 Å
Loop
- Sequence
- GUA*UUAAGC
- Length
- 9 nucleotides
- Bulged bases
- 7NRD|1|LA|G|3377
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRD_132 not in the Motif Atlas
- Homologous match to IL_8C3A_138
- Geometric discrepancy: 0.1742
- The information below is about IL_8C3A_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84428.1
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7NRD|1|LA|G|3328
7NRD|1|LA|U|3329
7NRD|1|LA|A|3330
*
7NRD|1|LA|U|3373
7NRD|1|LA|U|3374
7NRD|1|LA|A|3375
7NRD|1|LA|A|3376
7NRD|1|LA|G|3377
7NRD|1|LA|C|3378
Current chains
- Chain LA
- 25S rRNA (3184-MER)
Nearby chains
- Chain LE
- 60S ribosomal protein L3
- Chain LY
- 60S ribosomal protein L24-A
- Chain Lf
- 60S ribosomal protein L31-A
Coloring options: