IL_7NWG_077
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUGUUG*CUAGCC
- Length
- 12 nucleotides
- Bulged bases
- 7NWG|1|51|U|1947, 7NWG|1|51|U|2032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_077 not in the Motif Atlas
- Geometric match to IL_4WF9_084
- Geometric discrepancy: 0.3952
- The information below is about IL_4WF9_084
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
7NWG|1|51|G|1946
7NWG|1|51|U|1947
7NWG|1|51|G|1948
7NWG|1|51|U|1949
7NWG|1|51|U|1950
7NWG|1|51|G|1951
*
7NWG|1|51|C|2031
7NWG|1|51|U|2032
7NWG|1|51|A|2033
7NWG|1|51|G|2034
7NWG|1|51|C|2035
7NWG|1|51|C|2036
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 71
- 5S ribosomal RNA; 5S rRNA
- Chain H3
- L9
- Chain I3
- 60S ribosomal protein L10
- Chain S3
- 60S ribosomal protein L18a
- Chain m3
- 60S RIBOSOMAL PROTEIN EL40
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