IL_7NWG_084
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUGAG*CGAAAG
- Length
- 11 nucleotides
- Bulged bases
- 7NWG|1|51|A|2512, 7NWG|1|51|A|2513
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_084 not in the Motif Atlas
- Homologous match to IL_5TBW_063
- Geometric discrepancy: 0.206
- The information below is about IL_5TBW_063
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
7NWG|1|51|C|2446
7NWG|1|51|U|2447
7NWG|1|51|G|2448
7NWG|1|51|A|2449
7NWG|1|51|G|2450
*
7NWG|1|51|C|2509
7NWG|1|51|G|2510
7NWG|1|51|A|2511
7NWG|1|51|A|2512
7NWG|1|51|A|2513
7NWG|1|51|G|2514
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 81
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain A3
- L8
- Chain g3
- 60S ribosomal protein L34
- Chain l3
- eL39
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