3D structure

PDB id
7O19 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
AGAAUU*AGGAAU
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O19_036 not in the Motif Atlas
Geometric match to IL_5J7L_034
Geometric discrepancy: 0.0844
The information below is about IL_5J7L_034
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_04668.2
Basepair signature
cWW-cWW-cWW-L-R-L-R-cWW
Number of instances in this motif group
8

Unit IDs

7O19|1|AA|A|673
7O19|1|AA|G|674
7O19|1|AA|A|675
7O19|1|AA|A|676
7O19|1|AA|U|677
7O19|1|AA|U|678
*
7O19|1|AA|A|712
7O19|1|AA|G|713
7O19|1|AA|G|714
7O19|1|AA|A|715
7O19|1|AA|A|716
7O19|1|AA|U|717

Current chains

Chain AA
Ribosomal RNA 16S

Nearby chains

Chain AF
30S ribosomal protein S6
Chain AK
30S ribosomal protein S11
Chain AR
30S ribosomal protein S18
Chain AU
30S ribosomal protein S21
Chain BC
50S ribosomal protein L2

Coloring options:


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