IL_7O19_103

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUAAGUG*CUAAA

Length

12 nucleotides

Bulged bases

7O19|1|BA|A|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O19_103 not in the Motif Atlas

Homologous match to IL_5J7L_280

Geometric discrepancy: 0.0636

The information below is about IL_5J7L_280

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_57188.5

Basepair signature

cWW-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

5

Unit IDs

7O19|1|BA|U|1018
7O19|1|BA|U|1019
7O19|1|BA|A|1020
7O19|1|BA|A|1021
7O19|1|BA|G|1022
7O19|1|BA|U|1023
7O19|1|BA|G|1024
*
7O19|1|BA|C|1140
7O19|1|BA|U|1141
7O19|1|BA|A|1142
7O19|1|BA|A|1143
7O19|1|BA|A|1144

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BJ

50S ribosomal protein L13