IL_7OBR_026

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GACC*GGUC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OBR_026 not in the Motif Atlas

Geometric match to IL_6CZR_141

Geometric discrepancy: 0.3854

The information below is about IL_6CZR_141

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

36

Unit IDs

7OBR|1|5|G|164
7OBR|1|5|A|165
7OBR|1|5|C|166
7OBR|1|5|C|167
*
7OBR|1|5|G|268
7OBR|1|5|G|269
7OBR|1|5|U|270
7OBR|1|5|C|271

Current chains

Chain 5

28S rRNA

Nearby chains

Chain L

60S ribosomal protein L13

Chain h

uL29

Chain i

60S ribosomal protein L36