IL_7OBR_061

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGAG*CGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OBR_061 not in the Motif Atlas

Geometric match to IL_1SA9_002

Geometric discrepancy: 0.1751

The information below is about IL_1SA9_002

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.2

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

43

Unit IDs

7OBR|1|5|C|1431
7OBR|1|5|G|1432
7OBR|1|5|A|1433
7OBR|1|5|G|1434
*
7OBR|1|5|C|1450
7OBR|1|5|G|1451
7OBR|1|5|A|1452
7OBR|1|5|G|1453

Current chains

Chain 5

28S rRNA

Nearby chains

Chain Q

eL18