IL_7OBR_153
3D structure
- PDB id
- 7OBR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RNC-SRP early complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CUCAGUAC*GGAACCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OBR_153 not in the Motif Atlas
- Homologous match to IL_8C3A_125
- Geometric discrepancy: 0.0976
- The information below is about IL_8C3A_125
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.8
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7OBR|1|5|C|4596
7OBR|1|5|U|4597
7OBR|1|5|C|4598
7OBR|1|5|A|4599
7OBR|1|5|G|4600
7OBR|1|5|U|4601
7OBR|1|5|A|4602
7OBR|1|5|C|4603
*
7OBR|1|5|G|4608
7OBR|1|5|G|4609
7OBR|1|5|A|4610
7OBR|1|5|A|4611
7OBR|1|5|C|4612
7OBR|1|5|C|4613
7OBR|1|5|G|4614
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain B
- uL3
- Chain H
- 60S ribosomal protein L9
- Chain V
- Ribosomal protein L23
- Chain m
- 60S RIBOSOMAL PROTEIN EL40
Coloring options: