IL_7OHS_077

3D structure

PDB id

7OHS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population F from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.38 Å

Loop

Sequence

GUAC*GUC

Length

7 nucleotides

Bulged bases

7OHS|1|1|U|3319

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OHS_077 not in the Motif Atlas

Geometric match to IL_6WBR_001

Geometric discrepancy: 0.2895

The information below is about IL_6WBR_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

7OHS|1|1|G|3318
7OHS|1|1|U|3319
7OHS|1|1|A|3320
7OHS|1|1|C|3321
*
7OHS|1|1|G|3386
7OHS|1|1|U|3387
7OHS|1|1|C|3388

Current chains

Chain 1

25S rRNA

Nearby chains

Chain B

60S ribosomal protein L3