IL_7OSA_018
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAUCAA*UUUCAACG
- Length
- 14 nucleotides
- Bulged bases
- 7OSA|1|18S|U|313, 7OSA|1|18S|C|351
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_018 not in the Motif Atlas
- Homologous match to IL_8C3A_410
- Geometric discrepancy: 0.0633
- The information below is about IL_8C3A_410
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_46174.1
- Basepair signature
- cWW-cSS-tSS-tSH-L-cWW-tHW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7OSA|1|18S|U|311
7OSA|1|18S|A|312
7OSA|1|18S|U|313
7OSA|1|18S|C|314
7OSA|1|18S|A|315
7OSA|1|18S|A|316
*
7OSA|1|18S|U|348
7OSA|1|18S|U|349
7OSA|1|18S|U|350
7OSA|1|18S|C|351
7OSA|1|18S|A|352
7OSA|1|18S|A|353
7OSA|1|18S|C|354
7OSA|1|18S|G|355
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS8
- 40S ribosomal protein S8
- Chain uS12
- 40S ribosomal protein S23
- Chain uS17
- 40S ribosomal protein S11-B
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