IL_7OSA_032
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGUAG*UCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_032 not in the Motif Atlas
- Homologous match to IL_8P9A_407
- Geometric discrepancy: 0.084
- The information below is about IL_8P9A_407
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
7OSA|1|18S|C|627
7OSA|1|18S|G|628
7OSA|1|18S|U|629
7OSA|1|18S|A|630
7OSA|1|18S|G|631
*
7OSA|1|18S|U|968
7OSA|1|18S|C|969
7OSA|1|18S|A|970
7OSA|1|18S|A|971
7OSA|1|18S|G|972
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain 25S
- Large subunit ribosomal RNA; LSU rRNA
- Chain uS12
- 40S ribosomal protein S23
- Chain uS15
- 40S ribosomal protein S13
- Chain uS17
- 40S ribosomal protein S11-B
- Chain uS8
- 40S ribosomal protein S22-A
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