IL_7OSA_039
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AG*CAUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_039 not in the Motif Atlas
- Homologous match to IL_8P9A_417
- Geometric discrepancy: 0.1205
- The information below is about IL_8P9A_417
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_50694.7
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 27
Unit IDs
7OSA|1|18S|A|865
7OSA|1|18S|G|866
*
7OSA|1|18S|C|962
7OSA|1|18S|A|963
7OSA|1|18S|U|964
7OSA|1|18S|U|965
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS27
- 40S ribosomal protein S27-A
- Chain uS15
- 40S ribosomal protein S13
- Chain uS8
- 40S ribosomal protein S22-A
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