IL_7OSA_054
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 7OSA|1|18S|C|1158, 7OSA|1|18S|C|1159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_054 not in the Motif Atlas
- Homologous match to IL_8C3A_449
- Geometric discrepancy: 0.1485
- The information below is about IL_8C3A_449
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.10
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 16
Unit IDs
7OSA|1|18S|A|1157
7OSA|1|18S|C|1158
7OSA|1|18S|C|1159
7OSA|1|18S|A|1160
*
7OSA|1|18S|U|1617
7OSA|1|18S|C|1618
7OSA|1|18S|C|1619
7OSA|1|18S|C|1620
7OSA|1|18S|U|1621
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain PSIT
- Transfer RNA; tRNA
- Chain eS28
- eS28
- Chain uS10
- 40S ribosomal protein S20
- Chain uS7
- Rps5p
- Chain uS9
- BJ4_G0008010.mRNA.1.CDS.1
Coloring options: