IL_7OSA_150

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGAAU*AGGAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_150 not in the Motif Atlas

Geometric match to IL_5TBW_067

Geometric discrepancy: 0.1131

The information below is about IL_5TBW_067

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_95716.2

Basepair signature

cWW-cWW-tHS-tHS-tSH-cWW

Number of instances in this motif group

18

Unit IDs

7OSA|1|25S|U|1645
7OSA|1|25S|G|1646
7OSA|1|25S|A|1647
7OSA|1|25S|A|1648
7OSA|1|25S|U|1649
*
7OSA|1|25S|A|1806
7OSA|1|25S|G|1807
7OSA|1|25S|G|1808
7OSA|1|25S|A|1809
7OSA|1|25S|A|1810

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL27

60S ribosomal protein L27

Chain eL34

60S ribosomal protein L34-A

Chain uL2

60S ribosomal protein L2-B