IL_7OSA_203

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUUAU*AGAAU

Length

10 nucleotides

Bulged bases

7OSA|1|25S|A|3130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_203 not in the Motif Atlas

Homologous match to IL_8P9A_348

Geometric discrepancy: 0.081

The information below is about IL_8P9A_348

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

7OSA|1|25S|A|3103
7OSA|1|25S|U|3104
7OSA|1|25S|U|3105
7OSA|1|25S|A|3106
7OSA|1|25S|U|3107
*
7OSA|1|25S|A|3127
7OSA|1|25S|G|3128
7OSA|1|25S|A|3129
7OSA|1|25S|A|3130
7OSA|1|25S|U|3131

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL40

Ubiquitin

Chain uL13

60S ribosomal protein L16-A

Chain uL6

60S ribosomal protein L9-A