IL_7OSA_214

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUA*UUAAGC

Length

9 nucleotides

Bulged bases

7OSA|1|25S|G|3377

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_214 not in the Motif Atlas

Homologous match to IL_8P9A_359

Geometric discrepancy: 0.0853

The information below is about IL_8P9A_359

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_43622.1

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

7OSA|1|25S|G|3328
7OSA|1|25S|U|3329
7OSA|1|25S|A|3330
*
7OSA|1|25S|U|3373
7OSA|1|25S|U|3374
7OSA|1|25S|A|3375
7OSA|1|25S|A|3376
7OSA|1|25S|G|3377
7OSA|1|25S|C|3378

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL24

60S ribosomal protein L24-A

Chain eL31

BJ4_G0008090.mRNA.1.CDS.1

Chain uL3

60S ribosomal protein L3