3D structure

PDB id
7OSA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GUA*UUAAGC
Length
9 nucleotides
Bulged bases
7OSA|1|25S|G|3377
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OSA_214 not in the Motif Atlas
Homologous match to IL_8P9A_359
Geometric discrepancy: 0.0853
The information below is about IL_8P9A_359
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_43622.1
Basepair signature
cWW-cWW-L-cWW-L
Number of instances in this motif group
2

Unit IDs

7OSA|1|25S|G|3328
7OSA|1|25S|U|3329
7OSA|1|25S|A|3330
*
7OSA|1|25S|U|3373
7OSA|1|25S|U|3374
7OSA|1|25S|A|3375
7OSA|1|25S|A|3376
7OSA|1|25S|G|3377
7OSA|1|25S|C|3378

Current chains

Chain 25S
25S rRNA

Nearby chains

Chain eL24
60S ribosomal protein L24-A
Chain eL31
BJ4_G0008090.mRNA.1.CDS.1
Chain uL3
60S ribosomal protein L3

Coloring options:


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