IL_7OSA_218
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- ACGCAGCGAAAUGCGAUACGU*AAUCU
- Length
- 26 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_218 not in the Motif Atlas
- Homologous match to IL_8C3A_150
- Geometric discrepancy: 0.077
- The information below is about IL_8C3A_150
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44998.1
- Basepair signature
- cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R
- Number of instances in this motif group
- 2
Unit IDs
7OSA|1|58S|A|44
7OSA|1|58S|C|45
7OSA|1|58S|G|46
7OSA|1|58S|C|47
7OSA|1|58S|A|48
7OSA|1|58S|G|49
7OSA|1|58S|C|50
7OSA|1|58S|G|51
7OSA|1|58S|A|52
7OSA|1|58S|A|53
7OSA|1|58S|A|54
7OSA|1|58S|U|55
7OSA|1|58S|G|56
7OSA|1|58S|C|57
7OSA|1|58S|G|58
7OSA|1|58S|A|59
7OSA|1|58S|U|60
7OSA|1|58S|A|61
7OSA|1|58S|C|62
7OSA|1|58S|G|63
7OSA|1|58S|U|64
*
7OSA|1|58S|A|96
7OSA|1|58S|A|97
7OSA|1|58S|U|98
7OSA|1|58S|C|99
7OSA|1|58S|U|100
Current chains
- Chain 58S
- 5.8S rRNA
Nearby chains
- Chain 25S
- Large subunit ribosomal RNA; LSU rRNA
- Chain eL37
- Ribosomal protein L37
- Chain eL39
- 60S ribosomal protein L39
- Chain uL23
- 60S ribosomal protein L25
- Chain uL29
- BJ4_G0044250.mRNA.1.CDS.1
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