IL_7OSM_043
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGGGG*CAAG
- Length
- 9 nucleotides
- Bulged bases
- 7OSM|1|18S|G|876
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_043 not in the Motif Atlas
- Homologous match to IL_4V88_431
- Geometric discrepancy: 0.1174
- The information below is about IL_4V88_431
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7OSM|1|18S|C|874
7OSM|1|18S|G|875
7OSM|1|18S|G|876
7OSM|1|18S|G|877
7OSM|1|18S|G|878
*
7OSM|1|18S|C|950
7OSM|1|18S|A|951
7OSM|1|18S|A|952
7OSM|1|18S|G|953
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eL30
- BJ4_G0020000.mRNA.1.CDS.1
- Chain eS1
- 40S ribosomal protein S1
- Chain eS26
- 40S ribosomal protein S26
- Chain uS15
- 40S ribosomal protein S13
Coloring options: