IL_7OSM_138
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGU*AGUG
- Length
- 7 nucleotides
- Bulged bases
- 7OSM|1|25S|G|1429
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_138 not in the Motif Atlas
- Homologous match to IL_5TBW_057
- Geometric discrepancy: 0.1066
- The information below is about IL_5TBW_057
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- Isolated cWS basepair
- Motif group
- IL_73554.3
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 10
Unit IDs
7OSM|1|25S|C|1376
7OSM|1|25S|G|1377
7OSM|1|25S|U|1378
*
7OSM|1|25S|A|1428
7OSM|1|25S|G|1429
7OSM|1|25S|U|1430
7OSM|1|25S|G|1431
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain 58S
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain eL32
- HN1_G0013350.mRNA.1.CDS.1
- Chain uL15
- 60S ribosomal protein L28
- Chain uL4
- BJ4_G0008850.mRNA.1.CDS.1
Coloring options: