IL_7OSM_154
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGGAAUU*GGAGAUG
- Length
- 14 nucleotides
- Bulged bases
- 7OSM|1|25S|U|1716, 7OSM|1|25S|A|1729
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_154 not in the Motif Atlas
- Homologous match to IL_5TBW_073
- Geometric discrepancy: 0.0974
- The information below is about IL_5TBW_073
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_60192.2
- Basepair signature
- cWW-tSH-tSH-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
7OSM|1|25S|C|1711
7OSM|1|25S|G|1712
7OSM|1|25S|G|1713
7OSM|1|25S|A|1714
7OSM|1|25S|A|1715
7OSM|1|25S|U|1716
7OSM|1|25S|U|1717
*
7OSM|1|25S|G|1727
7OSM|1|25S|G|1728
7OSM|1|25S|A|1729
7OSM|1|25S|G|1730
7OSM|1|25S|A|1731
7OSM|1|25S|U|1732
7OSM|1|25S|G|1733
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL19
- 60S ribosomal protein L19-A
- Chain eL27
- 60S ribosomal protein L27
- Chain eL30
- BJ4_G0020000.mRNA.1.CDS.1
- Chain eL34
- 60S ribosomal protein L34-A
- Chain eL43
- 60S ribosomal protein L43-A
- Chain uS15
- 40S ribosomal protein S13
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