IL_7OSM_179
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUGA*UACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_179 not in the Motif Atlas
- Homologous match to IL_5TBW_100
- Geometric discrepancy: 0.1329
- The information below is about IL_5TBW_100
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7OSM|1|25S|U|2718
7OSM|1|25S|U|2719
7OSM|1|25S|G|2720
7OSM|1|25S|A|2721
*
7OSM|1|25S|U|2735
7OSM|1|25S|A|2736
7OSM|1|25S|C|2737
7OSM|1|25S|A|2738
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL18
- BJ4_G0033900.mRNA.1.CDS.1
- Chain eL21
- BJ4_G0003770.mRNA.1.CDS.1
- Chain eL29
- 60S ribosomal protein L29
- Chain eL42
- BJ4_G0001880.mRNA.1.CDS.1
- Chain uL18
- 60S ribosomal protein L5
Coloring options: