IL_7OW7_032
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GAAGGUGG*UGUUACAGC
- Length
- 17 nucleotides
- Bulged bases
- 7OW7|1|A|G|748, 7OW7|1|A|C|916
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OW7_032 not in the Motif Atlas
- Geometric match to IL_5TBW_020
- Geometric discrepancy: 0.1993
- The information below is about IL_5TBW_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07703.1
- Basepair signature
- cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OW7|1|A|G|745
7OW7|1|A|A|746
7OW7|1|A|A|747
7OW7|1|A|G|748
7OW7|1|A|G|749
7OW7|1|A|U|750
7OW7|1|A|G|751
7OW7|1|A|G|752
*
7OW7|1|A|U|911
7OW7|1|A|G|912
7OW7|1|A|U|913
7OW7|1|A|U|914
7OW7|1|A|A|915
7OW7|1|A|C|916
7OW7|1|A|A|917
7OW7|1|A|G|918
7OW7|1|A|C|919
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain M
- 60S ribosomal protein L18a
- Chain s
- 60S ribosomal protein L14
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