IL_7OW7_139
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CUCAGUAC*GGAACCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OW7_139 not in the Motif Atlas
- Homologous match to IL_8C3A_125
- Geometric discrepancy: 0.1699
- The information below is about IL_8C3A_125
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.8
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7OW7|1|A|C|4596
7OW7|1|A|U|4597
7OW7|1|A|C|4598
7OW7|1|A|A|4599
7OW7|1|A|G|4600
7OW7|1|A|U|4601
7OW7|1|A|A|4602
7OW7|1|A|C|4603
*
7OW7|1|A|G|4608
7OW7|1|A|G|4609
7OW7|1|A|A|4610
7OW7|1|A|A|4611
7OW7|1|A|C|4612
7OW7|1|A|C|4613
7OW7|1|A|G|4614
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L3 isoform a
- Chain P
- Eukaryotic translation initiation factor 6
- Chain Q
- 60S ribosomal protein L23
- Chain o
- 60S ribosomal protein L9
Coloring options: