IL_7OW7_155

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

G(PSU)U*GUCAGC

Length

9 nucleotides

Bulged bases

7OW7|1|A|G|5049

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OW7_155 not in the Motif Atlas

Homologous match to IL_8C3A_138

Geometric discrepancy: 0.3701

The information below is about IL_8C3A_138

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_84428.1

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

7OW7|1|A|G|5000
7OW7|1|A|PSU|5001
7OW7|1|A|U|5002
*
7OW7|1|A|G|5045
7OW7|1|A|U|5046
7OW7|1|A|C|5047
7OW7|1|A|A|5048
7OW7|1|A|G|5049
7OW7|1|A|C|5050

Current chains

Chain A

28S rRNA

Nearby chains

Chain E

60S ribosomal protein L3 isoform a

Chain X

60S ribosomal protein L31

Chain u

60S ribosomal protein L24