IL_7OW7_181
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GUAGU(A2M)(OMG)*CGAAAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: A2M, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OW7_181 not in the Motif Atlas
- Homologous match to IL_8P9A_289
- Geometric discrepancy: 0.0777
- The information below is about IL_8P9A_289
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_02666.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
7OW7|1|A|G|2358
7OW7|1|A|U|2359
7OW7|1|A|A|2360
7OW7|1|A|G|2361
7OW7|1|A|U|2362
7OW7|1|A|A2M|2363
7OW7|1|A|OMG|2364
*
7OW7|1|A|C|3858
7OW7|1|A|G|3859
7OW7|1|A|A|3860
7OW7|1|A|A|3861
7OW7|1|A|A|3862
7OW7|1|A|C|3863
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain C
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain F
- 60S ribosomal protein L4
- Chain J
- 60S ribosomal protein L17
Coloring options: