IL_7OW7_182

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

(OMU)GAAC*GAA

Length

8 nucleotides

Bulged bases

7OW7|1|A|A|2428

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OW7_182 not in the Motif Atlas

Homologous match to IL_8C3A_482

Geometric discrepancy: 0.3188

The information below is about IL_8C3A_482

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_04395.1

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

3

Unit IDs

7OW7|1|A|OMU|2415
7OW7|1|A|G|2416
7OW7|1|A|A|2417
7OW7|1|A|A|2418
7OW7|1|A|C|2419
*
7OW7|1|A|G|2427
7OW7|1|A|A|2428
7OW7|1|A|A|2429

Current chains

Chain A

28S rRNA

Nearby chains

Chain J

60S ribosomal protein L17

Chain L

60S ribosomal protein L19

Chain f

60S ribosomal protein L39